Package index • aniMotum

All functions
`aes_lst()`	aes_lst
`aniMotum-package` `aniMotum`	aniMotum
`auto_crs()`	Choose a projection from the extent of the data
`dummy()`	Roxygen commands
`ellie`	Southern elephant seal Argos satellite data (1 individual, sub-sampled for testing speed)
`emf()`	emf
`fit_mpm()`	fit a Move Persistence Model (`mpm`)
`fit_ssm()`	Fit Continuous-Time State-Space Models to filter Argos satellite geolocation data
`fmap()`	fmap
`format_data()`	Coerce input data into expected `aniMotum` format
`grab()`	grab `tibble`'s by name from a `aniMotum` model object
`join()`	join an mpm-estimated behavioural index to ssm-predicted locations
`map()`	map
`mpm_control()`	Control Values for `fit_mpm`.
`osar()`	calculate one-step-ahead (prediction) residuals from a `aniMotum` `ssm` fit
`plot(<mpm_df>)`	plot
`plot(<osar>)`	plot
`plot(<sim>)`	plot
`plot(<sim_fit>)`	plot
`plot(<sim_post>)`	plot
`plot(<ssm_df>)`	plot
`print(<jcrw_ssm>)`	print one individual's part of a joint crw fit
`print(<jmp_ssm>)`	print one individual's part of a joint ssm fit
`print(<ssm>)`	print `aniMotum` fit object summary information
`print(<summary.jssm_df>)`	print a joint ssm fit summary
`route_path()`	Re-route a movement path around land using the `pathroutr` package
`sese`	Southern elephant seal Argos satellite data (3 individuals)
`sese2`	Southern elephant seal Argos satellite data (2 highly sub-sampled individuals)
`sese2_n`	Southern elephant seal Argos satellite data (2 highly sub-sampled individuals)
`share_control()`	Specify which parameters are shared among individuals
`sim()`	simulate animal tracks
`sim_filter()`	Filter `sim_fit` simulations
`sim_fit()`	simulate animal tracks from a `ssm` fit
`sim_jcrw()`	Simulate tracks from the joint correlated random walk
`sim_post()`	simulate from the posterior of a `ssm` fit.
`smru_haulout()`	Add a haulout indicator to tracking data from an SMRU haulout file
`ssm_control()`	Control Values for `fit_ssm`.
`summary(<jssm_df>)`	summarise a joint (hierarchical) ssm fit
`summary(<ssm_df>)`	object summaries
`wese_sb`	Weddell seal Argos satellite data (1 individual)

Reference

All functions